TGen investigates global fungal threat; discovers six new species associated with bat evolution

Histoplasma infection poses deadly risk to HIV and other immune-compromised patients


H. capsulatum. Methenamine silver stain. This media comes from the Centers for Disease Control and Prevention’s Public Health Image Library (PHIL) Photo Credit: CDC/Dr. Libero Ajello

FLAGSTAFF, Ariz. — June 1, 2016 — A fungal infection associated with a high percentage of deaths among HIV and other immune-compromised patients is more diverse than previously known and likely spread around the world by bats.

A global assessment of the fungus Histoplasma by the Translational Genomics Research Institute (TGen) found that the pathogen is actually divided among six species, and that its spread and speciation from continent-to-continent over the past 9 million years coincides with the global dispersal and evolution of bats.

Published today in the scientific journal PLOS Neglected Tropical Diseases, TGen’s study of 234 samples of Histoplasma capsulatum from around the world used the latest in genetic sequencing to characterize the differences between various species of this fungus. The study estimates a timeframe for its evolution, based on the average rate of genetic mutations.

“We need to better understand this disease so we can be better prepared for infectious outbreaks, and to see its relationship to similar fungal infections, such as Valley Fever,” said Dr. Bridget Barker, TGen Assistant Professor of Pathogen Genomics and the senior author of this study. “There currently is no cure and no vaccine for this disease.”

Histoplasma, which thrives in soil containing large amounts of bird or bat droppings, causes histoplasmosis, an infection most often acquired by breathing in microscopic fungal spores in the air. Histoplasmosis also is known as cave disease, spelunker’s disease or Darling’s disease, after the early 20th century scientist who discovered it. While most people don’t get sick, the disease often results in a fever, cough and fatigue. Many get better without medication, but some infections can be severe.

Histoplasma is responsible for up to 30 percent of all HIV/AIDS-related deaths in Latin America, according to the study. And the U.S. Centers for Disease Control and Prevention warns that other parts of the world are at risk where access to anti-retroviral drugs is limited.

“And with the increase of immunosuppressive therapy due to transplants and other chronic inflammatory disorders, disseminated histoplasmosis is becoming more frequent and is geographically expanding,” said Dr. Marcus Teixeira, a TGen Post-Doctoral Fellow and the study’s lead author. “In patients with an impaired immune system, the disease is mostly fatal without an early diagnosis and proper treatment.”

The fungus thrives in moderate temperature, relatively high humidity and low light conditions. Besides bats, Histoplasma also is known to infect baboons, badgers, sea otters, raccoons, horses, cats and dogs.

The study — Worldwide phylogenetic distribution and population dynamics of the genus Histoplasma — found that the disease likely began in Latin America and spread worldwide over the last 2-9 million years, during the Miocene and Pleistocene epochs.

Relatively little is known about the genetic background of the causative agents of histoplasmosis, its relationship with different hosts, and the variation of this disease in clinical presentation. Dr. Teixeira suggests that additional studies are needed to explore the genetic diversity of Histoplasma and correlate that information with medical data to provide public health professionals with answers should there be a disease outbreak or severe clinical cases.

“Understanding histoplasmosis could not only lead to better treatments for this disease, but also lead to better patient care for related fungal infections,” said Dr. Barker, head of TGen’s Northern Arizona Center for Valley Fever Research. She also heads TGen’s research into dogs infected with Valley Fever. Pet parents can help participate in that study by registering their dogs at:

Drs. Barker and Teixeira are part of TGen’s Pathogen Genomics Division, TGen North, in Flagstaff, Ariz.

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About TGen
Translational Genomics Research Institute (TGen) is a Phoenix, Arizona-based non-profit organization dedicated to conducting groundbreaking research with life changing results. TGen is focused on helping patients with neurological disorders, cancer, and diabetes, through cutting edge translational research (the process of rapidly moving research towards patient benefit).  TGen physicians and scientists work to unravel the genetic components of both common and rare complex diseases in adults and children. Working with collaborators in the scientific and medical communities literally worldwide, TGen makes a substantial contribution to help our patients through efficiency and effectiveness of the translational process. For more information, visit: Follow TGen on FacebookLinkedIn and Twitter @TGen.

Media Contact:
Steve Yozwiak
TGen Senior Science Writer

Posted in AZBio News.